Friday, June 4, 2010

Protein Function

Proteins are very important molecules in our cells. They are involved in virtually all cell functions. Each protein within the body has a specific function. Some proteins are involved in structural support, while others are involved in bodily movement, or in defense against germs.

Proteins vary in structure as well as function. They are constructed from a set of 20 amino acids and have distinct three-dimensional shapes. Below is a list of several types of proteins and their functions.

Protein Functions
Antibodies - are specialized proteins involved in defending the body from antigens (foreign invaders). One way antibodies destroy antigens is by immobilizing them so that they can be destroyed by white blood cells.

Contractile Proteins - are responsible for movement. Examples include actin and myosin. These proteins are involved in muscle contraction and movement.

Enzymes - are proteins that facilitate biochemical reactions. They are often referred to as catalysts because they speed up chemical reactions. Examples include the enzymes lactase and pepsin. Lactase breaks down the sugar lactose found in milk. Pepsin is a digestive enzyme that works in the stomach to break down proteins in food.

Hormonal Proteins - are messenger proteins which help to coordinate certain bodily activities. Examples include insulin, oxytocin, and somatotropin. Insulin regulates glucose metabolism by controlling the blood-sugar concentration. Oxytocin stimulates contractions in females during childbirth. Somatotropin is a growth hormone that stimulates protein production in muscle cells.

Structural Proteins - are fibrous and stringy and provide support. Examples include keratin, collagen, and elastin. Keratins strengthen protective coverings such as hair, quills, feathers, horns, and beaks. Collagens and elastin provide support for connective tissues such as tendons and ligaments.

Storage Proteins - store amino acids. Examples include ovalbumin and casein. Ovalbumin is found in egg whites and casein is a milk-based protein.

Transport Proteins - are carrier proteins which move molecules from one place to another around the body. Examples include hemoglobin and cytochromes. Hemoglobin transports oxygen through the blood. Cytochromes operate in the electron transport chain as electron carrier proteins.

Polymers

A polymer is a substance with a high molecular mass that is composed of a large number of repeating units. These units, called monomers, are connected by covalent chemical bonds.

Some polymers are composed of a single type of monomer, while others may consist of two, three or more different monomers. Many biological macromolecules are examples of natural polymers. These include the carbohydrates, starch, cellulose and glycogen (branched chains of glucose monomers), and chitin (chains of N-acetyl-glucosamine). Examples of polymers consisting of mixtures of monomers are the nucleic acids, DNA and RNA, made from units of 4 different nucleotides, and proteins, which consist of a mixture of the 20 standard amino acids. Natural rubber, or latex, is a natural hydrocarbon polymer found in the sap of some plants. Natural, biological polymers have both structural roles and physiological functions, and are involved in the control of cellular operations such as growth, replication and metabolism.

Synthetic polymers can be produced commercially, and are traditionally derived from petroleum products. They have a wide variety of properties and uses. The most common synthetic polymers are plastics such as polyethylene and nylon. Synthetic polymers made out of glycolic and lactic acids, and other biodegradable materials, have become increasingly popular for use in biomedical applications. Man-made polymers that react to their surroundings are known as smart polymers, or stimulus-responsive polymers, and can be used for a variety of purposes in technology and biomedicine.

DNA Transcription

DNA transcription is a process that involves the transcribing of genetic information from DNA to RNA.

DNA is housed within the nucleus of our cells. It controls cellular activity by coding for the production of enzymes and proteins. The information in DNA is not directly converted into proteins, but must first be copied into RNA. This ensures that the information contained in the DNA does not become tainted.

DNA Transcription
DNA consists of four nucleotide bases [adenine (A), guanine (G), cytosine (C) and thymine (T)] that are paired together (A-T and C-G) to give DNA its double helical shape.

DNA is transcribed by an enzyme called RNA polymerase. Specific nucleotide sequences tell RNA polymerase where to begin and where to end. RNA polymerase attaches to the DNA at a specific area called the promoter region. The DNA strand opens and allows RNA polymerase to transcribe only a single strand of DNA into a single stranded RNA polymer called messenger RNA (mRNA).

Like DNA, RNA is composed of nucleotide bases. RNA however, contains the nucleotides adenine, guanine, cytosine and uricil (U). When RNA polymerase transcribes the DNA, guanine pairs with cytosine and adenine pairs with uricil. RNA polymerase moves along the DNA until it reaches a terminator sequence. At that point, RNA polymerase releases the mRNA polymer and detaches from the DNA.

Since proteins are constructed in the cytoplasm of the cell by a process called translation, mRNA must cross the nuclear membrane to reach the cytoplasm. Once in the cytoplasm, mRNA along with ribosomes and another RNA molecule called transfer RNA, work together to produce proteins. Proteins can be manufactured in large quantities because a single DNA sequence can be transcribed by many RNA polymerase molecules at once.